Changeset fb95a5 for src/molecule.cpp
- Timestamp:
- Aug 5, 2015, 5:32:09 PM (10 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, Candidate_v1.7.0, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- 54bdaa
- Parents:
- f714763
- git-author:
- Frederik Heber <heber@…> (07/15/15 23:23:30)
- git-committer:
- Frederik Heber <heber@…> (08/05/15 17:32:09)
- File:
-
- 1 edited
-
src/molecule.cpp (modified) (8 diffs)
Legend:
- Unmodified
- Added
- Removed
-
src/molecule.cpp
rf714763 rfb95a5 83 83 BondCount(this,boost::bind(&molecule::doCountBonds,this),"BondCount"), 84 84 atomIdPool(1, 20, 100), 85 _lastchangedatom(NULL), 86 _lastchangedatomid(-1), 85 87 last_atom(0) 86 88 { … … 153 155 OBSERVE; 154 156 if(atomIdPool.reserveId(newNr)){ 155 _lastchangedatom = target;156 157 NOTIFY(AtomNrChanged); 157 158 if (oldNr != -1) // -1 is reserved and indicates no number … … 161 162 "molecule::changeAtomNr() - given target is NULL, cannot set Nr or name."); 162 163 target->setNr(newNr); 164 _lastchangedatom = target; 165 _lastchangedatomid = target->getId(); 163 166 InsertLocalToGlobalId(target); 164 167 setAtomName(target); … … 222 225 { 223 226 _lastchangedatom = _atom; 227 _lastchangedatomid = _atom->getId(); 224 228 NOTIFY(AtomRemoved); 225 229 } … … 242 246 { 243 247 _lastchangedatom = key; 248 _lastchangedatomid = key->getId(); 244 249 NOTIFY(AtomRemoved); 245 250 } … … 266 271 NOTIFY(AtomInserted); 267 272 _lastchangedatom = key; 273 _lastchangedatomid = key->getId(); 268 274 std::pair<iterator,bool> res = atomIds.insert(key->getId()); 269 275 if (res.second) { // push atom if went well … … 1056 1062 // emit others about one of our atoms moved 1057 1063 _lastchangedatom = const_cast<atom *>(_atom); 1064 _lastchangedatomid = _atom->getId(); 1058 1065 OBSERVE; 1059 1066 NOTIFY(AtomMoved); … … 1064 1071 // emit others about one of our atoms moved 1065 1072 _lastchangedatom = const_cast<atom *>(_atom); 1073 _lastchangedatomid = _atom->getId(); 1066 1074 OBSERVE; 1067 1075 NOTIFY(FormulaChanged);
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