source: tests/regression/Fragmentation/testsuite-fragmentation.at

Candidate_v1.7.1 stable v1.7.1
Last change on this file was dce5a3, checked in by Frederik Heber <frederik.heber@…>, 3 weeks ago

Adds AddSelectedAtomsAsFragmentAction.

  • this action allows calculating the energy of an entire molecule without relying on BOSSANOVA/fragmentation. This allows to compute small molecules which are not saturated other well-captured by the fragmentation scheme.
  • DOC: Adds entry in userguide.
  • TEST: Adds regresssion test case.
  • Property mode set to 100644
File size: 2.2 KB
RevLine 
[6253ed]1#
2# MoleCuilder - creates and alters molecular systems
3# Copyright (C) 2008-2012 University of Bonn
[73a5f7]4# Copyright (C) 2013-2016 Frederik Heber
[6253ed]5#
6# This program is free software: you can redistribute it and/or modify
7# it under the terms of the GNU General Public License as published by
8# the Free Software Foundation, either version 3 of the License, or
9# (at your option) any later version.
10#
11# This program is distributed in the hope that it will be useful,
12# but WITHOUT ANY WARRANTY; without even the implied warranty of
13# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14# GNU General Public License for more details.
15#
16# You should have received a copy of the GNU General Public License
17# along with this program. If not, see <http://www.gnu.org/licenses/>.
18#
[c8446c]19AT_BANNER([MoleCuilder - fragmentation tests])
[17f3cd]20
[c8446c]21# check fragmentation
[7811bf]22m4_include([Fragmentation/FragmentMolecule/testsuite-fragmentation-fragment-molecule.at])
[17f3cd]23
[dce5a3]24# check adding set of atoms
25m4_include([Fragmentation/AddSelectedAtomsAsFragment/testsuite-fragmentation-add-selected-atoms-as-fragment.at])
26
[55e1bc]27# check analysis
28m4_include([Fragmentation/AnalyseFragmentationResults/testsuite-fragmentation-analyse-fragment-results.at])
29
[7811bf]30# check whether parsing of BondFragment files and re-rwriting config files is working (exit code is 2 as we don't need to continue wrt to ...OrderAtSite)
31m4_include([Fragmentation/FragmentMolecule-MaxOrder/testsuite-fragmentation-fragment-molecule-maxorder.at])
[5589e7e]32
33# check storing saturated fragment
34m4_include([Fragmentation/StoreSaturatedFragment/testsuite-fragmentation-store-saturated-fragment.at])
[a61dbb]35
[9a1e099]36# check whether helper program works
37m4_include([Fragmentation/DiffFragmentResultContainer/testsuite-fragmentation-difffragmenresultcontainer.at])
38
[a61dbb]39# check automation
[73a5f7]40m4_include([Fragmentation/FragmentationAutomation/testsuite-fragmentation-fragmentation-automation.at])
41
42# parse/save state of FragmentationResultsContainer
43m4_include([Fragmentation/ParseSaveFragmentResults/testsuite-fragmentation-parse-save-fragment-results.at])
[999eaf]44
45# evaluate stability of a molecule from homology graphs
46m4_include([Fragmentation/EvaluateStability/testsuite-fragmentation-evaluate-stability.at])
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