| 1 | my rank: 0, my pid: 32375
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| 2 | Type: BATCH
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| 3 |
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| 4 |
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| 5 |
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| 6 |
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| 7 |
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| 8 | Loaded Chemistry.Chemistry_MoleculeFactory NOW GLOBAL .
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| 9 |
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| 10 | Loaded MPQC.Chemistry_QC_ModelFactory NOW GLOBAL .
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| 11 |
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| 12 | Loaded MPQC.SimpleDriver NOW GLOBAL .
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| 13 |
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| 14 |
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| 15 | molfactory of type Chemistry.Chemistry_MoleculeFactory
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| 16 | successfully instantiated
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| 17 |
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| 18 | mpqcfactory of type MPQC.Chemistry_QC_ModelFactory
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| 19 | successfully instantiated
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| 20 |
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| 21 | driver of type MPQC.SimpleDriver
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| 22 | successfully instantiated
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| 23 |
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| 24 |
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| 25 | driver))))ModelFactory---->ModelFactory((((mpqcfactory
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| 26 | connection made successfully
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| 27 |
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| 28 | mpqcfactory))))MoleculeFactory---->MoleculeFactory((((molfactory
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| 29 | connection made successfully
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| 30 |
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| 31 |
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| 32 | ------------------------------------
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| 33 | Instance name: mpqcfactory
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| 34 | Port name: configure
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| 35 | ------------------------------------
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| 36 | New parameters:
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| 37 | STO-3G
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| 38 | ------------------------------------
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| 39 | updated parameter mpqcfactory configure basis
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| 40 |
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| 41 | ------------------------------------
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| 42 | Instance name: mpqcfactory
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| 43 | Port name: configure
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| 44 | ------------------------------------
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| 45 | New parameters:
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| 46 | HF
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| 47 | ------------------------------------
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| 48 | updated parameter mpqcfactory configure theory
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| 49 |
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| 50 | ------------------------------------
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| 51 | Instance name: mpqcfactory
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| 52 | Port name: configure
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| 53 | ------------------------------------
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| 54 | New parameters:
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| 55 | /home/jpkenny/src/mpqc-clean/mpqc/src/bin/mpqc/validate/ref//ccafe_h2o.xyz
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| 56 | ------------------------------------
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| 57 | updated parameter mpqcfactory configure molecule_filename
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| 58 |
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| 59 | ------------------------------------
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| 60 | Instance name: driver
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| 61 | Port name: configure
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| 62 | ------------------------------------
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| 63 | New parameters:
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| 64 | false
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| 65 | ------------------------------------
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| 66 | updated parameter driver configure do_gradient
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| 67 |
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| 68 |
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| 69 | Using ProcMessageGrp for message passing (number of nodes = 1).
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| 70 |
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| 71 | SIMPLE CHEMISTRY COMPONENT DRIVER
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| 72 | ----------------------------------
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| 73 | SIMPLE DRIVER: getting model factory
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| 74 | SIMPLE DRIVER: getting model
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| 75 | MoleculeFactory: reading /home/jpkenny/src/mpqc-clean/mpqc/src/bin/mpqc/validate/ref//ccafe_h2o.xyz
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| 76 | units are bohr
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| 77 | model input:
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| 78 | molecule<Molecule>: (
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| 79 | symmetry = auto
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| 80 | unit = bohr
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| 81 | {n atoms geometry } = {
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| 82 | 0 8 [ 0 0 0.123932 ]
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| 83 | 1 1 [ 0 1.43052 -0.983447 ]
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| 84 | 2 1 [ 0 -1.43052 -0.983447 ]
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| 85 | }
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| 86 | )
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| 87 | model<CLHF>:(
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| 88 | molecule=$:molecule
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| 89 | basis<GaussianBasisSet>:(
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| 90 | name = "STO-3G"
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| 91 | molecule = $..:molecule
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| 92 | )
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| 93 | )
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| 94 |
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| 95 | Reading file /home/jpkenny/src/mpqc-clean/mpqc.install/share/mpqc/2.3.0-alpha/atominfo.kv.
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| 96 | Molecule: setting point group to c2v
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| 97 | Reading file /home/jpkenny/src/mpqc-clean/mpqc.install/share/mpqc/2.3.0-alpha/basis/sto-3g.kv.
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| 98 |
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| 99 | CLSCF::init: total charge = 0
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| 100 |
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| 101 | Starting from core Hamiltonian guess
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| 102 |
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| 103 | Using symmetric orthogonalization.
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| 104 | n(basis): 4 0 1 2
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| 105 | Maximum orthogonalization residual = 1.93072
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| 106 | Minimum orthogonalization residual = 0.342284
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| 107 | docc = [ 3 0 1 1 ]
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| 108 | nbasis = 7
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| 109 | Molecular formula: H2O
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| 110 | molecule<Molecule>: (
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| 111 | symmetry = c2v
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| 112 | unit = "bohr"
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| 113 | { n atoms geometry }={
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| 114 | 1 O [ 0.0000000000 0.0000000000 0.1239321808]
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| 115 | 2 H [ -0.0000000000 1.4305200000 -0.9834468192]
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| 116 | 3 H [ -0.0000000000 -1.4305200000 -0.9834468192]
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| 117 | }
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| 118 | )
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| 119 | Atomic Masses:
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| 120 | 15.99491 1.00783 1.00783
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| 121 |
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| 122 | CLHF: changing atomic coordinates:
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| 123 | Molecular formula: H2O
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| 124 | molecule<Molecule>: (
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| 125 | symmetry = c2v
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| 126 | unit = "bohr"
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| 127 | { n atoms geometry }={
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| 128 | 1 O [ 0.0000000000 0.0000000000 0.1239321808]
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| 129 | 2 H [ -0.0000000000 1.4305200000 -0.9834468192]
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| 130 | 3 H [ -0.0000000000 -1.4305200000 -0.9834468192]
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| 131 | }
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| 132 | )
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| 133 | Atomic Masses:
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| 134 | 15.99491 1.00783 1.00783
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| 135 | SIMPLE DRIVER: getting molecule
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| 136 | SIMPLE DRIVER: Evaluating energy
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| 137 |
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| 138 | SCF::compute: energy accuracy = 1.0000000e-06
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| 139 |
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| 140 | nuclear repulsion energy = 9.1939256843
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| 141 |
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| 142 | integral intermediate storage = 15554 bytes
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| 143 | integral cache = 31983998 bytes
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| 144 | Using symmetric orthogonalization.
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| 145 | n(basis): 4 0 1 2
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| 146 | Maximum orthogonalization residual = 1.93072
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| 147 | Minimum orthogonalization residual = 0.342284
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| 148 | 565 integrals
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| 149 | iter 1 energy = -74.6360043626 delta = 7.47911e-01
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| 150 | 565 integrals
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| 151 | iter 2 energy = -74.9431457881 delta = 2.37053e-01
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| 152 | 565 integrals
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| 153 | iter 3 energy = -74.9619473624 delta = 6.65205e-02
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| 154 | 565 integrals
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| 155 | iter 4 energy = -74.9629005499 delta = 1.84783e-02
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| 156 | 565 integrals
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| 157 | iter 5 energy = -74.9629461076 delta = 4.24909e-03
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| 158 | 565 integrals
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| 159 | iter 6 energy = -74.9629464948 delta = 3.69725e-04
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| 160 | 565 integrals
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| 161 | iter 7 energy = -74.9629464958 delta = 1.92828e-05
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| 162 |
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| 163 | HOMO is 1 B1 = -0.391243
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| 164 | LUMO is 4 A1 = 0.605578
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| 165 |
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| 166 | total scf energy = -74.9629464958
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| 167 | ##specific go command successful
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| 168 |
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| 169 |
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| 170 | driver))))ModelFactory-\ \-ModelFactory((((mpqcfactory
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| 171 | connection broken successfully
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| 172 |
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| 173 | mpqcfactory))))MoleculeFactory-\ \-MoleculeFactory((((molfactory
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| 174 | connection broken successfully
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| 175 |
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| 176 |
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| 177 | remove molfactory
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| 178 |
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| 179 | remove mpqcfactory
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| 180 |
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| 181 | remove driver
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| 182 |
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| 183 |
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| 184 | molfactory of type Chemistry.Chemistry_MoleculeFactory
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| 185 | successfully instantiated
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| 186 |
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| 187 | mpqcfactory of type MPQC.Chemistry_QC_ModelFactory
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| 188 | successfully instantiated
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| 189 |
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| 190 | driver of type MPQC.SimpleDriver
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| 191 | successfully instantiated
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| 192 |
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| 193 |
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| 194 | driver))))ModelFactory---->ModelFactory((((mpqcfactory
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| 195 | connection made successfully
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| 196 |
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| 197 | mpqcfactory))))MoleculeFactory---->MoleculeFactory((((molfactory
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| 198 | connection made successfully
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| 199 |
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| 200 |
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| 201 | ------------------------------------
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| 202 | Instance name: mpqcfactory
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| 203 | Port name: configure
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| 204 | ------------------------------------
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| 205 | New parameters:
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| 206 | STO-3G
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| 207 | ------------------------------------
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| 208 | updated parameter mpqcfactory configure basis
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| 209 |
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| 210 | ------------------------------------
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| 211 | Instance name: mpqcfactory
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| 212 | Port name: configure
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| 213 | ------------------------------------
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| 214 | New parameters:
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| 215 | HF
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| 216 | ------------------------------------
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| 217 | updated parameter mpqcfactory configure theory
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| 218 |
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| 219 | ------------------------------------
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| 220 | Instance name: mpqcfactory
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| 221 | Port name: configure
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| 222 | ------------------------------------
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| 223 | New parameters:
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| 224 | /home/jpkenny/src/mpqc-clean/mpqc/src/bin/mpqc/validate/ref//ccafe_h2o.xyz
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| 225 | ------------------------------------
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| 226 | updated parameter mpqcfactory configure molecule_filename
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| 227 |
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| 228 | ------------------------------------
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| 229 | Instance name: driver
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| 230 | Port name: configure
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| 231 | ------------------------------------
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| 232 | New parameters:
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| 233 | false
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| 234 | ------------------------------------
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| 235 | updated parameter driver configure do_gradient
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| 236 |
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| 237 |
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| 238 |
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| 239 |
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| 240 | CCACHEM_RESULTS_DIR environment variable not found,
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| 241 | don't know where to log results
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| 242 |
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| 243 | Using ProcMessageGrp for message passing (number of nodes = 1).
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| 244 |
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| 245 | SIMPLE CHEMISTRY COMPONENT DRIVER
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| 246 | ----------------------------------
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| 247 | SIMPLE DRIVER: getting model factory
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| 248 | SIMPLE DRIVER: getting model
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| 249 | MoleculeFactory: reading /home/jpkenny/src/mpqc-clean/mpqc/src/bin/mpqc/validate/ref//ccafe_h2o.xyz
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| 250 | units are bohr
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| 251 | model input:
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| 252 | molecule<Molecule>: (
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| 253 | symmetry = auto
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| 254 | unit = bohr
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| 255 | {n atoms geometry } = {
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| 256 | 0 8 [ 0 0 0.123932 ]
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| 257 | 1 1 [ 0 1.43052 -0.983447 ]
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| 258 | 2 1 [ 0 -1.43052 -0.983447 ]
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| 259 | }
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| 260 | )
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| 261 | model<CLHF>:(
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| 262 | molecule=$:molecule
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| 263 | basis<GaussianBasisSet>:(
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| 264 | name = "STO-3G"
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| 265 | molecule = $..:molecule
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| 266 | )
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| 267 | )
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| 268 |
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| 269 | Reading file /home/jpkenny/src/mpqc-clean/mpqc.install/share/mpqc/2.3.0-alpha/atominfo.kv.
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| 270 | Molecule: setting point group to c2v
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| 271 | Reading file /home/jpkenny/src/mpqc-clean/mpqc.install/share/mpqc/2.3.0-alpha/basis/sto-3g.kv.
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| 272 |
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| 273 | CLSCF::init: total charge = 0
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| 274 |
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| 275 | Starting from core Hamiltonian guess
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| 276 |
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| 277 | Using symmetric orthogonalization.
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| 278 | n(basis): 4 0 1 2
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| 279 | Maximum orthogonalization residual = 1.93072
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| 280 | Minimum orthogonalization residual = 0.342284
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| 281 | docc = [ 3 0 1 1 ]
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| 282 | nbasis = 7
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| 283 | Molecular formula: H2O
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| 284 | molecule<Molecule>: (
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| 285 | symmetry = c2v
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| 286 | unit = "bohr"
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| 287 | { n atoms geometry }={
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| 288 | 1 O [ 0.0000000000 0.0000000000 0.1239321808]
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| 289 | 2 H [ -0.0000000000 1.4305200000 -0.9834468192]
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| 290 | 3 H [ -0.0000000000 -1.4305200000 -0.9834468192]
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| 291 | }
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| 292 | )
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| 293 | Atomic Masses:
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| 294 | 15.99491 1.00783 1.00783
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| 295 |
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| 296 | CLHF: changing atomic coordinates:
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| 297 | Molecular formula: H2O
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| 298 | molecule<Molecule>: (
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| 299 | symmetry = c2v
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| 300 | unit = "bohr"
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| 301 | { n atoms geometry }={
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| 302 | 1 O [ 0.0000000000 0.0000000000 0.1239321808]
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| 303 | 2 H [ -0.0000000000 1.4305200000 -0.9834468192]
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| 304 | 3 H [ -0.0000000000 -1.4305200000 -0.9834468192]
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| 305 | }
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| 306 | )
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| 307 | Atomic Masses:
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| 308 | 15.99491 1.00783 1.00783
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| 309 | SIMPLE DRIVER: getting molecule
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| 310 | SIMPLE DRIVER: Evaluating energy
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| 311 |
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| 312 | SCF::compute: energy accuracy = 1.0000000e-06
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| 313 |
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| 314 | nuclear repulsion energy = 9.1939256843
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| 315 |
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| 316 | integral intermediate storage = 15554 bytes
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| 317 | integral cache = 31983998 bytes
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| 318 | Using symmetric orthogonalization.
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| 319 | n(basis): 4 0 1 2
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| 320 | Maximum orthogonalization residual = 1.93072
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| 321 | Minimum orthogonalization residual = 0.342284
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| 322 | 565 integrals
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| 323 | iter 1 energy = -74.6360043626 delta = 7.47911e-01
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| 324 | 565 integrals
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| 325 | iter 2 energy = -74.9431457881 delta = 2.37053e-01
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| 326 | 565 integrals
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| 327 | iter 3 energy = -74.9619473624 delta = 6.65205e-02
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| 328 | 565 integrals
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| 329 | iter 4 energy = -74.9629005499 delta = 1.84783e-02
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| 330 | 565 integrals
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| 331 | iter 5 energy = -74.9629461076 delta = 4.24909e-03
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| 332 | 565 integrals
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| 333 | iter 6 energy = -74.9629464948 delta = 3.69725e-04
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| 334 | 565 integrals
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| 335 | iter 7 energy = -74.9629464958 delta = 1.92828e-05
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| 336 |
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| 337 | HOMO is 1 B1 = -0.391243
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| 338 | LUMO is 4 A1 = 0.605578
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| 339 |
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| 340 | total scf energy = -74.9629464958
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| 341 | ##specific go command successful
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| 342 |
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| 343 |
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| 344 | driver))))ModelFactory-\ \-ModelFactory((((mpqcfactory
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| 345 | connection broken successfully
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| 346 |
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| 347 | mpqcfactory))))MoleculeFactory-\ \-MoleculeFactory((((molfactory
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| 348 | connection broken successfully
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| 349 |
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| 350 |
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| 351 | remove molfactory
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| 352 |
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| 353 | remove mpqcfactory
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| 354 |
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| 355 | remove driver
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| 356 |
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| 357 |
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| 358 |
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| 359 | bye!
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| 360 | exit
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| 361 |
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| 362 |
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| 363 | CCACHEM_RESULTS_DIR environment variable not found,
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| 364 | don't know where to log results
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| 365 |
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